: Category 1017

Category 1017
Genomics

Description

Main genomics fields likely to be of interest to researchers.

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30 Data-Fields

Field ID	Description	Category
22025	Affymetrix quality control metric "Cluster.CR"	Genotyping process and sample QC
22026	Affymetrix quality control metric "dQC"	Genotyping process and sample QC
22002	CEL files	Genotyping process and sample QC	‡
22024	DNA concentration	Genotyping process and sample QC
22006	Genetic ethnic grouping	Genotyping process and sample QC
22021	Genetic kinship to other participants	Genotyping process and sample QC
22009	Genetic principal components	Genotyping process and sample QC
22001	Genetic sex	Genotyping process and sample QC
22000	Genotype measurement batch	Genotyping process and sample QC
22007	Genotype measurement plate	Genotyping process and sample QC
22008	Genotype measurement well	Genotyping process and sample QC
22003	Heterozygosity	Genotyping process and sample QC
22004	Heterozygosity, PCA corrected	Genotyping process and sample QC
22005	Missingness	Genotyping process and sample QC
22027	Outliers for heterozygosity or missing rate	Genotyping process and sample QC
22019	Sex chromosome aneuploidy	Genotyping process and sample QC
22022	Sex inference X probe-intensity	Genotyping process and sample QC
22023	Sex inference Y probe-intensity	Genotyping process and sample QC
22029	Use in phasing Chromosome X	Genotyping process and sample QC
22030	Use in phasing Chromosome XY	Genotyping process and sample QC
22028	Use in phasing Chromosomes 1-22	Genotyping process and sample QC
22020	Used in genetic principal components	Genotyping process and sample QC
22182	HLA imputation values	HLA	†
22013	Genetic relatedness IBS0	Interim genotype release
22018	Genetic relatedness exclusions	Interim genotype release
22012	Genetic relatedness factor	Interim genotype release
22011	Genetic relatedness pairing	Interim genotype release
22010	Recommended genomic analysis exclusions	Interim genotype release
22051	UKBiLEVE genotype quality control for samples	Interim genotype release
22052	UKBiLEVE unrelatedness indicator	Interim genotype release

1 fields marked ‡ are blob/bulk.
1 fields marked † are compound.

16 Applications

Application ID	Title
5974	Development and validation of risk prediction models for cancer.
7089	Exome Sequencing of All Premature Coronary Artery Disease Participants in UK Biobank
8447	The genetic architecture and prediction of anthropomorphic measurements
12885	Genetic determinants of objective physical activity levels and fitness in the UK Biobank
13352	Evaluation of Association of TRPV4 Variation with Heart Failure, Respiratory, Renal and Menstruation Phenotypes
13721	Causal associations of circulating biomarkers with cardiovascular disease
18219	Genetic and epidemiological analyses of low back pain
19056	Copy-number variants in Cardiovascular and Neuropsychiatric disorders
20175	Nutrition, diet and health: examining causal associations and gene-environment interactions
20915	Genome-wide integrative and network-based approaches to obstructive lung diseases and their comorbidities
21552	Detection of large-scale copy-number and copy-neutral mosaic alterations in circulating leukocyte DNA of UK Biobank cancer cases and cancer-free controls
22783	The joint analysis of imaging data and genetic data for early tumor detection, prevention, diagnosis and treatment
23509	Genome-wide and brain-wide association studies
27837	Statistical Methods for Large Scale Genetic Studies
31187	Integrative Prioritization of Loci for Alcohol Use Disorders and Associated Complex Traits
61650	Genetic variation in sodium-glucose cotransporter 2 (SGLT2) and glucagon-like peptide-1 receptor (GLP1R) and cardiovascular outcomes

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