Genomics ⏵ Genotypes ⏵ Genotyping process and sample QC
DescriptionInformation from the genotype calling and sample quality control pipeline, such as relatedness and population structure (PCA), which may be important for downstream analyses. Category also includes experimental factors from the Affymetrix genotype calling pipeline.
Descriptions of all the Sample-QC fields are in Resource 531.
Information on estimated relatedness can be obtained using rel option with the gfetch utility - see the Notes on Category 263 and Resource 668.