| Title: | Variants in urate transporters, ADH1B, GCKR and MEPE genes associate with transition from asymptomatic hyperuricaemia to gout: results of the first gout versus asymptomatic hyperuricaemia GWAS in Caucasians using data from the UK Biobank |
| Journal: | Annals of the Rheumatic Diseases |
| Published: | 8 Apr 2021 |
| Pubmed: | https://pubmed.ncbi.nlm.nih.gov/33832965/ |
| DOI: | https://doi.org/10.1136/annrheumdis-2020-219796 |
| URL: | https://nottingham-repository.worktribe.com/preview/5414714/Extended%20report%20-%20GWAS%20gout%20vs%20AH.pdf |
Publication 5984
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Abstract
OBJECTIVES: To perform a genome-wide association study (GWAS) of gout cases versus asymptomatic hyperuricaemia (AH) controls, and gout cases versus normouricaemia controls, and to generate a polygenic risk score (PRS) to determine gout-case versus AH-control status.</p>
METHODS: Gout cases and AH controls (serum urate (SU) ≥6.0 mg/dL) from the UK Biobank were divided into discovery (4934 cases, 56 948 controls) and replication (2115 cases, 24 406 controls) cohorts. GWAS was conducted and PRS generated using summary statistics in discovery cohort as the base dataset and the replication cohort as the target dataset. The predictive ability of the model was evaluated. GWAS were performed to identify variants associated with gout compared with normouricaemic controls using SU <6.0 mg/dL and <7.0 mg/dL thresholds, respectively.</p>
RESULTS: Thirteen independent single nucleotide polymorphisms (SNPs) in ABCG2, SLC2A9, SLC22A11, GCKR, MEPE, PPM1K-DT, LOC105377323 and ADH1B reached genome-wide significance and replicated as predictors of AH to gout transition. Twelve of 13 associations were novel for this transition, and rs1229984 (ADH1B) was identified as GWAS locus for gout for the first time. The best PRS model was generated from association data of 17 SNPs; and had predictive ability of 58.5% that increased to 69.2% on including demographic factors. Two novel SNPs rs760077(MTX1) and rs3800307(PRSS16) achieved GWAS significance for association with gout compared with normouricaemic controls using both SU thresholds.</p>
CONCLUSION: The association of urate transporters with gout supports the central role of hyperuricaemia in its pathogenesis. Larger GWAS are required to identify if variants in inflammatory pathways contribute to progression from AH to gout.</p>
26 Keywords
- ATP Binding Cassette Transporter, Subfamily G, Member 2
- Adaptor Proteins, Signal Transducing
- Aged
- Alcohol Dehydrogenase
- Asymptomatic Diseases
- Disease Progression
- Extracellular Matrix Proteins
- Female
- Genome-Wide Association Study
- Glucose Transport Proteins, Facilitative
- Glycoproteins
- Gout
- Humans
- Hyperuricemia
- Logistic Models
- Male
- Middle Aged
- Mitochondrial Membrane Transport Proteins
- Multifactorial Inheritance
- Neoplasm Proteins
- Organic Anion Transporters, Sodium-Independent
- Phosphoproteins
- Polymorphism, Single Nucleotide
- Risk Factors
- Serine Endopeptidases
- White People
3 Authors
- Gabriela Sandoval-Plata
- Kevin Morgan
- Abhishek Abhishek
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